Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RNF152P1-201ENST00000397754 604 ntBASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 AL353692.3-201ENST00000407031 1396 ntBASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 REXO1L11P-201ENST00000620964 1927 ntBASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 AC005521.1-201ENST00000393351 872 ntBASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 TSPY5P-201ENST00000426936 936 ntBASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 AC117947.1-201ENST00000427448 529 ntBASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 AC092597.1-201ENST00000487352 616 ntBASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 AC012306.2-201ENST00000609350 630 ntBASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms