Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTOP1Q7RTM1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 UGT1A2P-201ENST00000454886 866 ntBASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTOP1Q7RTM1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 AP002414.1-201ENST00000391405 1147 ntBASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 ADH5P3-201ENST00000433842 1137 ntBASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 AC051619.7-201ENST00000568314 623 ntBASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 SIRPAP1-201ENST00000448467 1770 ntBASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
OTOP1Q7RTM1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AC009949.1-201ENST00000623048 1830 ntBASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 OR8S1-201ENST00000310194 1080 ntBASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 CNN2P2-201ENST00000443536 909 ntBASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 CNN2P3-201ENST00000450201 906 ntBASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AP005018.1-201ENST00000525475 301 ntBASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AL136317.3-201ENST00000618497 906 ntBASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms