Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
REEP3Q6NUK4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 AC005915.1-201ENST00000624912 2018 ntBASIC16.21■□□□□ 0.19
REEP3Q6NUK4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 AC090616.6-201ENST00000582640 721 ntBASIC16.21■□□□□ 0.19
REEP3Q6NUK4 AL138831.2-201ENST00000606564 490 ntBASIC16.21■□□□□ 0.19
REEP3Q6NUK4 AL592071.1-201ENST00000611956 408 ntBASIC16.21■□□□□ 0.19
REEP3Q6NUK4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
REEP3Q6NUK4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
REEP3Q6NUK4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
REEP3Q6NUK4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.21■□□□□ 0.18
REEP3Q6NUK4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
REEP3Q6NUK4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.21■□□□□ 0.18
REEP3Q6NUK4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.21■□□□□ 0.18
REEP3Q6NUK4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.2■□□□□ 0.18
REEP3Q6NUK4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 AC092053.1-201ENST00000605787 1936 ntBASIC16.2■□□□□ 0.18
REEP3Q6NUK4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 FAM220CP-201ENST00000395253 831 ntBASIC16.2■□□□□ 0.18
REEP3Q6NUK4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 AC022616.7-201ENST00000525383 220 ntBASIC16.2■□□□□ 0.18
REEP3Q6NUK4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 AC011840.4-201ENST00000578471 627 ntBASIC16.2■□□□□ 0.18
REEP3Q6NUK4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 AL049757.1-201ENST00000616842 1596 ntBASIC16.2■□□□□ 0.18
REEP3Q6NUK4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
REEP3Q6NUK4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms