Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.77■□□□□ 0.91
RNF20Q5VTR2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RNF20Q5VTR2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF20Q5VTR2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF20Q5VTR2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF20Q5VTR2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.75■□□□□ 0.91
RNF20Q5VTR2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 UPK3BP1-201ENST00000428678 509 ntBASIC20.75■□□□□ 0.91
RNF20Q5VTR2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 PMPCAP1-201ENST00000508114 1576 ntBASIC20.75■□□□□ 0.91
RNF20Q5VTR2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 AC080080.1-201ENST00000625121 2420 ntBASIC20.75■□□□□ 0.91
RNF20Q5VTR2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF20Q5VTR2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF20Q5VTR2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms