Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AC025580.3-201ENST00000617932 1424 ntBASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 PMS2P2-201ENST00000425039 1128 ntBASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.6■□□□□ 0.09
RNFT1Q5M7Z0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNFT1Q5M7Z0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNFT1Q5M7Z0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNFT1Q5M7Z0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNFT1Q5M7Z0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 LYSMD4-203ENST00000378904 2122 ntBASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 PAWRP1-201ENST00000451083 565 ntBASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 CXCL1P1-201ENST00000502804 216 ntBASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 AL031432.2-201ENST00000566714 459 ntBASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 AL928711.1-201ENST00000570165 459 ntBASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms