Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 AC060834.1-201ENST00000443027 2032 ntBASIC19.77■□□□□ 0.76
LONRF3Q496Y0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LONRF3Q496Y0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LONRF3Q496Y0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
LONRF3Q496Y0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.77■□□□□ 0.75
LONRF3Q496Y0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 AC007967.3-201ENST00000434308 558 ntBASIC19.76■□□□□ 0.75
LONRF3Q496Y0 FAAHP1-202ENST00000446499 1238 ntBASIC19.76■□□□□ 0.75
LONRF3Q496Y0 KRT16P4-201ENST00000453883 522 ntBASIC19.76■□□□□ 0.75
LONRF3Q496Y0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 VENTXP7-201ENST00000475503 772 ntBASIC19.76■□□□□ 0.75
LONRF3Q496Y0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.76■□□□□ 0.75
LONRF3Q496Y0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.75■□□□□ 0.75
LONRF3Q496Y0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms