Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP3CAQ08209 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP3CAQ08209 LINC02012-201ENST00000608206 1725 ntBASIC18.75■□□□□ 0.59
PPP3CAQ08209 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP3CAQ08209 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP3CAQ08209 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.75■□□□□ 0.59
PPP3CAQ08209 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.75■□□□□ 0.59
PPP3CAQ08209 SART3-203ENST00000546611 1184 ntBASIC18.75■□□□□ 0.59
PPP3CAQ08209 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 AC008608.2-201ENST00000606089 416 ntBASIC18.75■□□□□ 0.59
PPP3CAQ08209 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PPP3CAQ08209 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP3CAQ08209 AC020916.1-201ENST00000587762 1774 ntBASIC18.75■□□□□ 0.59
PPP3CAQ08209 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CAQ08209 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 AC060834.1-201ENST00000443027 2032 ntBASIC18.74■□□□□ 0.59
PPP3CAQ08209 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.74■□□□□ 0.59
PPP3CAQ08209 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
PPP3CAQ08209 AL356309.3-201ENST00000624132 1934 ntBASIC18.74■□□□□ 0.59
PPP3CAQ08209 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CAQ08209 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 AC097637.2-201ENST00000624096 1997 ntBASIC18.73■□□□□ 0.59
PPP3CAQ08209 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CAQ08209 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CAQ08209 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CAQ08209 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 PRYP5-201ENST00000451909 266 ntBASIC18.73■□□□□ 0.59
PPP3CAQ08209 SAPCD2P3-201ENST00000455031 850 ntBASIC18.73■□□□□ 0.59
PPP3CAQ08209 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CAQ08209 PCDHA12-202ENST00000613593 2588 ntBASIC18.73■□□□□ 0.59
PPP3CAQ08209 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP3CAQ08209 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CAQ08209 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CAQ08209 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CAQ08209 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 EMBP1-201ENST00000458200 901 ntBASIC18.72■□□□□ 0.59
PPP3CAQ08209 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CAQ08209 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.72■□□□□ 0.59
PPP3CAQ08209 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CAQ08209 AL139288.1-201ENST00000623748 933 ntBASIC18.72■□□□□ 0.59
PPP3CAQ08209 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CAQ08209 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CAQ08209 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CAQ08209 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms