Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 KRT18P65-201ENST00000439811 1286 ntBASIC13.36□□□□□ -0.27
HIST1H1AQ02539 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 AP001094.4-201ENST00000579008 2176 ntBASIC13.36□□□□□ -0.27
HIST1H1AQ02539 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 SPDYE15P-201ENST00000424157 909 ntBASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.35□□□□□ -0.27
HIST1H1AQ02539 BX664615.1-201ENST00000443558 458 ntBASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 AC139887.4-201ENST00000607877 719 ntBASIC13.35□□□□□ -0.27
HIST1H1AQ02539 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 KRT89P-201ENST00000620027 1478 ntBASIC13.35□□□□□ -0.27
HIST1H1AQ02539 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1AQ02539 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 AC009949.1-201ENST00000623048 1830 ntBASIC13.34□□□□□ -0.27
HIST1H1AQ02539 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1AQ02539 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms