Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NKX6-1P78426 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NKX6-1P78426 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX6-1P78426 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX6-1P78426 FLJ13224-201ENST00000313737 1514 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
NKX6-1P78426 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NKX6-1P78426 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NKX6-1P78426 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 PMS2P2-201ENST00000425039 1128 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 RPS8P6-201ENST00000426177 609 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX6-1P78426 AL591424.1-201ENST00000442569 1213 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.34■□□□□ 0.05
NKX6-1P78426 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.34■□□□□ 0.05
NKX6-1P78426 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX6-1P78426 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 AC010327.4-202ENST00000591484 748 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 AC140113.2-201ENST00000604370 208 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 AL355385.1-201ENST00000606123 409 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 ABALON-201ENST00000629058 1903 ntBASIC15.34■□□□□ 0.05
NKX6-1P78426 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX6-1P78426 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NKX6-1P78426 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX6-1P78426 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NKX6-1P78426 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX6-1P78426 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-1P78426 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-1P78426 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-1P78426 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-1P78426 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-1P78426 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-1P78426 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.33■□□□□ 0.05
NKX6-1P78426 INTS4P1-201ENST00000438455 1935 ntBASIC15.33■□□□□ 0.05
NKX6-1P78426 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NKX6-1P78426 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NKX6-1P78426 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.33■□□□□ 0.05
NKX6-1P78426 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.33■□□□□ 0.05
NKX6-1P78426 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.33■□□□□ 0.05
NKX6-1P78426 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX6-1P78426 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NKX6-1P78426 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NKX6-1P78426 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.33■□□□□ 0.04
NKX6-1P78426 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX6-1P78426 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.33■□□□□ 0.04
NKX6-1P78426 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.33■□□□□ 0.04
NKX6-1P78426 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.33■□□□□ 0.04
NKX6-1P78426 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.33■□□□□ 0.04
NKX6-1P78426 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 AP001269.4-201ENST00000609611 512 ntBASIC15.33■□□□□ 0.04
NKX6-1P78426 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms