Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.65■□□□□ 0.74
CCNA1P78396 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCNA1P78396 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.65■□□□□ 0.74
CCNA1P78396 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCNA1P78396 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.65■□□□□ 0.74
CCNA1P78396 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.65■□□□□ 0.74
CCNA1P78396 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.65■□□□□ 0.74
CCNA1P78396 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCNA1P78396 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.65■□□□□ 0.74
CCNA1P78396 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 AC099522.2-201ENST00000607001 744 ntBASIC19.65■□□□□ 0.74
CCNA1P78396 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.65■□□□□ 0.74
CCNA1P78396 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.65■□□□□ 0.74
CCNA1P78396 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.65■□□□□ 0.74
CCNA1P78396 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.65■□□□□ 0.74
CCNA1P78396 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNA1P78396 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CCNA1P78396 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CCNA1P78396 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CCNA1P78396 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.64■□□□□ 0.74
CCNA1P78396 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCNA1P78396 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCNA1P78396 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.64■□□□□ 0.73
CCNA1P78396 COX20P2-201ENST00000452636 358 ntBASIC19.64■□□□□ 0.73
CCNA1P78396 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCNA1P78396 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.64■□□□□ 0.73
CCNA1P78396 RNA5SP421-201ENST00000516864 134 ntBASIC19.64■□□□□ 0.73
CCNA1P78396 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.64■□□□□ 0.73
CCNA1P78396 AC093520.2-201ENST00000561830 333 ntBASIC19.64■□□□□ 0.73
CCNA1P78396 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.64■□□□□ 0.73
CCNA1P78396 AC005498.2-205ENST00000593218 784 ntBASIC19.64■□□□□ 0.73
CCNA1P78396 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.64■□□□□ 0.73
CCNA1P78396 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.64■□□□□ 0.73
CCNA1P78396 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.64■□□□□ 0.73
CCNA1P78396 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCNA1P78396 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.64■□□□□ 0.73
CCNA1P78396 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.64■□□□□ 0.73
CCNA1P78396 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCNA1P78396 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCNA1P78396 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCNA1P78396 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCNA1P78396 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCNA1P78396 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCNA1P78396 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.63■□□□□ 0.73
CCNA1P78396 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.63■□□□□ 0.73
CCNA1P78396 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.63■□□□□ 0.73
CCNA1P78396 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.63■□□□□ 0.73
CCNA1P78396 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.63■□□□□ 0.73
CCNA1P78396 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.63■□□□□ 0.73
CCNA1P78396 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 AL592309.1-201ENST00000443127 649 ntBASIC19.63■□□□□ 0.73
CCNA1P78396 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 KRT8P48-201ENST00000515599 1220 ntBASIC19.63■□□□□ 0.73
CCNA1P78396 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.63■□□□□ 0.73
CCNA1P78396 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.63■□□□□ 0.73
CCNA1P78396 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.63■□□□□ 0.73
CCNA1P78396 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.63■□□□□ 0.73
CCNA1P78396 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCNA1P78396 AL138781.2-201ENST00000617896 1843 ntBASIC19.62■□□□□ 0.73
CCNA1P78396 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.62■□□□□ 0.73
CCNA1P78396 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 AC020763.4-201ENST00000623414 4170 ntBASIC19.62■□□□□ 0.73
CCNA1P78396 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.62■□□□□ 0.73
CCNA1P78396 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.62■□□□□ 0.73
CCNA1P78396 CNN2P2-201ENST00000443536 909 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms