Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.91□□□□□ -0.02
ABCA4P78363 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.91□□□□□ -0.02
ABCA4P78363 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
ABCA4P78363 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ABCA4P78363 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 TNXA-203ENST00000507684 2038 ntBASIC14.91□□□□□ -0.02
ABCA4P78363 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA4P78363 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ABCA4P78363 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA4P78363 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA4P78363 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ABCA4P78363 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA4P78363 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.91□□□□□ -0.02
ABCA4P78363 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA4P78363 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.91□□□□□ -0.02
ABCA4P78363 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA4P78363 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ABCA4P78363 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA4P78363 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA4P78363 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA4P78363 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.9□□□□□ -0.02
ABCA4P78363 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.9□□□□□ -0.02
ABCA4P78363 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 BCAR1-209ENST00000546196 1340 ntBASIC14.9□□□□□ -0.02
ABCA4P78363 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 PI4KAP1-204ENST00000612579 1703 ntBASIC14.9□□□□□ -0.02
ABCA4P78363 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ABCA4P78363 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
ABCA4P78363 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.9□□□□□ -0.02
ABCA4P78363 AC092474.2-201ENST00000424288 719 ntBASIC14.9□□□□□ -0.02
ABCA4P78363 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCA4P78363 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA4P78363 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.9□□□□□ -0.02
ABCA4P78363 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.9□□□□□ -0.02
ABCA4P78363 AC005225.4-201ENST00000557330 545 ntBASIC14.9□□□□□ -0.02
ABCA4P78363 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA4P78363 AC138932.1-201ENST00000534164 6830 ntBASIC14.89□□□□□ -0.03
ABCA4P78363 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.89□□□□□ -0.03
ABCA4P78363 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.89□□□□□ -0.03
ABCA4P78363 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA4P78363 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ABCA4P78363 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA4P78363 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ABCA4P78363 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.89□□□□□ -0.03
ABCA4P78363 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA4P78363 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA4P78363 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
ABCA4P78363 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.89□□□□□ -0.03
ABCA4P78363 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA4P78363 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA4P78363 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
ABCA4P78363 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ABCA4P78363 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms