Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.27■□□□□ 0.04
SEC61A1P61619 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.27■□□□□ 0.04
SEC61A1P61619 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SEC61A1P61619 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.27■□□□□ 0.04
SEC61A1P61619 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.27■□□□□ 0.04
SEC61A1P61619 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.27■□□□□ 0.04
SEC61A1P61619 KRT18P56-201ENST00000507275 550 ntBASIC15.27■□□□□ 0.04
SEC61A1P61619 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
SEC61A1P61619 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.27■□□□□ 0.04
SEC61A1P61619 MIR3180-4-201ENST00000582223 153 ntBASIC15.27■□□□□ 0.04
SEC61A1P61619 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.27■□□□□ 0.04
SEC61A1P61619 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.27■□□□□ 0.04
SEC61A1P61619 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.27■□□□□ 0.03
SEC61A1P61619 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
SEC61A1P61619 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.27■□□□□ 0.03
SEC61A1P61619 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.27■□□□□ 0.03
SEC61A1P61619 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 AL163051.1-201ENST00000569214 1512 ntBASIC15.27■□□□□ 0.03
SEC61A1P61619 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.27■□□□□ 0.03
SEC61A1P61619 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC61A1P61619 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.27■□□□□ 0.03
SEC61A1P61619 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SEC61A1P61619 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.26■□□□□ 0.03
SEC61A1P61619 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
SEC61A1P61619 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 PCDHA1-201ENST00000378133 2726 ntBASIC15.26■□□□□ 0.03
SEC61A1P61619 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.26■□□□□ 0.03
SEC61A1P61619 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SEC61A1P61619 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.26■□□□□ 0.03
SEC61A1P61619 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SEC61A1P61619 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.26■□□□□ 0.03
SEC61A1P61619 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SEC61A1P61619 AC092119.3-201ENST00000612618 583 ntBASIC15.26■□□□□ 0.03
SEC61A1P61619 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.26■□□□□ 0.03
SEC61A1P61619 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.26■□□□□ 0.03
SEC61A1P61619 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 FLJ38576-201ENST00000623820 2459 ntBASIC15.26■□□□□ 0.03
SEC61A1P61619 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SEC61A1P61619 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC61A1P61619 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 AC009102.3-201ENST00000623118 1491 ntBASIC15.26■□□□□ 0.03
SEC61A1P61619 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC61A1P61619 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 AC016734.2-201ENST00000624325 1377 ntBASIC15.25■□□□□ 0.03
SEC61A1P61619 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.25■□□□□ 0.03
SEC61A1P61619 LINC01126-201ENST00000623515 1646 ntBASIC15.25■□□□□ 0.03
SEC61A1P61619 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.25■□□□□ 0.03
SEC61A1P61619 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms