Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDL3P58872 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RHBDL3P58872 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDL3P58872 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RHBDL3P58872 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.4■□□□□ 0.86
RHBDL3P58872 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.4■□□□□ 0.86
RHBDL3P58872 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
RHBDL3P58872 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.4■□□□□ 0.86
RHBDL3P58872 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RHBDL3P58872 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.4■□□□□ 0.86
RHBDL3P58872 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
RHBDL3P58872 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.4■□□□□ 0.86
RHBDL3P58872 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.4■□□□□ 0.86
RHBDL3P58872 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.4■□□□□ 0.86
RHBDL3P58872 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.4■□□□□ 0.86
RHBDL3P58872 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.4■□□□□ 0.86
RHBDL3P58872 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
RHBDL3P58872 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDL3P58872 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RHBDL3P58872 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.39■□□□□ 0.86
RHBDL3P58872 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.39■□□□□ 0.86
RHBDL3P58872 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RHBDL3P58872 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RHBDL3P58872 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.39■□□□□ 0.85
RHBDL3P58872 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RHBDL3P58872 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RHBDL3P58872 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RHBDL3P58872 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RHBDL3P58872 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.39■□□□□ 0.85
RHBDL3P58872 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.39■□□□□ 0.85
RHBDL3P58872 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.39■□□□□ 0.85
RHBDL3P58872 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RHBDL3P58872 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.39■□□□□ 0.85
RHBDL3P58872 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.39■□□□□ 0.85
RHBDL3P58872 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RHBDL3P58872 AC105339.1-204ENST00000636249 355 ntBASIC20.39■□□□□ 0.85
RHBDL3P58872 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RHBDL3P58872 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RHBDL3P58872 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RHBDL3P58872 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.39■□□□□ 0.85
RHBDL3P58872 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.39■□□□□ 0.85
RHBDL3P58872 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RHBDL3P58872 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.39■□□□□ 0.85
RHBDL3P58872 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.38■□□□□ 0.85
RHBDL3P58872 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.38■□□□□ 0.85
RHBDL3P58872 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.38■□□□□ 0.85
RHBDL3P58872 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.38■□□□□ 0.85
RHBDL3P58872 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RHBDL3P58872 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.38■□□□□ 0.85
RHBDL3P58872 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.38■□□□□ 0.85
RHBDL3P58872 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.38■□□□□ 0.85
RHBDL3P58872 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.38■□□□□ 0.85
RHBDL3P58872 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RHBDL3P58872 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
RHBDL3P58872 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.37■□□□□ 0.85
RHBDL3P58872 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.37■□□□□ 0.85
RHBDL3P58872 AP000344.2-201ENST00000512987 629 ntBASIC20.37■□□□□ 0.85
RHBDL3P58872 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.37■□□□□ 0.85
RHBDL3P58872 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.37■□□□□ 0.85
RHBDL3P58872 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.37■□□□□ 0.85
RHBDL3P58872 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RHBDL3P58872 AC099522.2-201ENST00000607001 744 ntBASIC20.37■□□□□ 0.85
RHBDL3P58872 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 AL121761.2-201ENST00000598007 1648 ntBASIC20.37■□□□□ 0.85
RHBDL3P58872 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.37■□□□□ 0.85
RHBDL3P58872 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.37■□□□□ 0.85
RHBDL3P58872 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHBDL3P58872 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms