Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.14■□□□□ 0.17
PER3P56645 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.14■□□□□ 0.17
PER3P56645 HMGN1P19-201ENST00000436976 333 ntBASIC16.14■□□□□ 0.17
PER3P56645 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.14■□□□□ 0.17
PER3P56645 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.14■□□□□ 0.17
PER3P56645 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.14■□□□□ 0.17
PER3P56645 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.14■□□□□ 0.17
PER3P56645 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.14■□□□□ 0.17
PER3P56645 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.14■□□□□ 0.17
PER3P56645 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.14■□□□□ 0.17
PER3P56645 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PER3P56645 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PER3P56645 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PER3P56645 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PER3P56645 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PER3P56645 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PER3P56645 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PER3P56645 AC012317.2-201ENST00000623305 2251 ntBASIC16.14■□□□□ 0.17
PER3P56645 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PER3P56645 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.13■□□□□ 0.17
PER3P56645 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 NFIC-211ENST00000641145 8399 ntBASIC16.13■□□□□ 0.17
PER3P56645 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PER3P56645 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.13■□□□□ 0.17
PER3P56645 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.13■□□□□ 0.17
PER3P56645 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.13■□□□□ 0.17
PER3P56645 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.13■□□□□ 0.17
PER3P56645 RNA5SP416-201ENST00000516838 111 ntBASIC16.13■□□□□ 0.17
PER3P56645 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.13■□□□□ 0.17
PER3P56645 AP001160.2-201ENST00000596071 487 ntBASIC16.13■□□□□ 0.17
PER3P56645 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.13■□□□□ 0.17
PER3P56645 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.13■□□□□ 0.17
PER3P56645 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PER3P56645 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PER3P56645 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.12■□□□□ 0.17
PER3P56645 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.12■□□□□ 0.17
PER3P56645 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.12■□□□□ 0.17
PER3P56645 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PER3P56645 GPX1P2-201ENST00000429271 606 ntBASIC16.12■□□□□ 0.17
PER3P56645 KRT18P3-201ENST00000451602 1288 ntBASIC16.12■□□□□ 0.17
PER3P56645 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
PER3P56645 IGHV3-22-201ENST00000520721 359 ntBASIC16.12■□□□□ 0.17
PER3P56645 OR7E14P-202ENST00000530490 1290 ntBASIC16.12■□□□□ 0.17
PER3P56645 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.12■□□□□ 0.17
PER3P56645 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PER3P56645 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.12■□□□□ 0.17
PER3P56645 Z83851.2-201ENST00000609564 659 ntBASIC16.12■□□□□ 0.17
PER3P56645 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.12■□□□□ 0.17
PER3P56645 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.12■□□□□ 0.17
PER3P56645 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PER3P56645 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.12■□□□□ 0.17
PER3P56645 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PER3P56645 AL024508.2-201ENST00000607749 1894 ntBASIC16.12■□□□□ 0.17
PER3P56645 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PER3P56645 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms