Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH6P55285 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 AC022211.2-201ENST00000585075 2527 ntBASIC18.1■□□□□ 0.49
CDH6P55285 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH6P55285 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDH6P55285 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDH6P55285 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH6P55285 AC012615.1-201ENST00000565797 1299 ntBASIC18.1■□□□□ 0.49
CDH6P55285 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH6P55285 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 PRORSD1P-202ENST00000563365 2154 ntBASIC18.1■□□□□ 0.49
CDH6P55285 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH6P55285 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH6P55285 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH6P55285 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH6P55285 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH6P55285 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDH6P55285 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH6P55285 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH6P55285 STK19B-204ENST00000512515 211 ntBASIC18.09■□□□□ 0.49
CDH6P55285 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH6P55285 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH6P55285 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH6P55285 AC099336.1-202ENST00000602961 463 ntBASIC18.09■□□□□ 0.49
CDH6P55285 AC114341.1-201ENST00000618070 349 ntBASIC18.09■□□□□ 0.49
CDH6P55285 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 AD001527.2-201ENST00000622994 785 ntBASIC18.09■□□□□ 0.49
CDH6P55285 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDH6P55285 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH6P55285 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH6P55285 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH6P55285 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH6P55285 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH6P55285 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH6P55285 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CDH6P55285 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH6P55285 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH6P55285 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH6P55285 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH6P55285 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH6P55285 AC132938.5-201ENST00000624980 1813 ntBASIC18.08■□□□□ 0.48
CDH6P55285 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CDH6P55285 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH6P55285 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH6P55285 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH6P55285 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH6P55285 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH6P55285 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.08■□□□□ 0.48
CDH6P55285 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH6P55285 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH6P55285 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH6P55285 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH6P55285 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH6P55285 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH6P55285 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH6P55285 AC093525.9-201ENST00000624961 1746 ntBASIC18.08■□□□□ 0.48
CDH6P55285 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CDH6P55285 AC009336.1-201ENST00000608941 1553 ntBASIC18.08■□□□□ 0.48
CDH6P55285 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms