Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 UBALD1-205ENST00000590891 2641 ntBASIC19.13■□□□□ 0.65
PMS1P54277 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PMS1P54277 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.12■□□□□ 0.65
PMS1P54277 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
PMS1P54277 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.12■□□□□ 0.65
PMS1P54277 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.12■□□□□ 0.65
PMS1P54277 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.12■□□□□ 0.65
PMS1P54277 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.12■□□□□ 0.65
PMS1P54277 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.12■□□□□ 0.65
PMS1P54277 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.12■□□□□ 0.65
PMS1P54277 AP000550.4-202ENST00000639755 178 ntBASIC19.12■□□□□ 0.65
PMS1P54277 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PMS1P54277 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PMS1P54277 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.12■□□□□ 0.65
PMS1P54277 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PMS1P54277 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
PMS1P54277 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.12■□□□□ 0.65
PMS1P54277 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PMS1P54277 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PMS1P54277 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.11■□□□□ 0.65
PMS1P54277 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
PMS1P54277 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PMS1P54277 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PMS1P54277 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PMS1P54277 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.11■□□□□ 0.65
PMS1P54277 AC096582.2-201ENST00000510860 516 ntBASIC19.11■□□□□ 0.65
PMS1P54277 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.11■□□□□ 0.65
PMS1P54277 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PMS1P54277 Z69720.1-201ENST00000601483 472 ntBASIC19.11■□□□□ 0.65
PMS1P54277 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.11■□□□□ 0.65
PMS1P54277 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PMS1P54277 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PMS1P54277 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.1■□□□□ 0.65
PMS1P54277 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.1■□□□□ 0.65
PMS1P54277 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.1■□□□□ 0.65
PMS1P54277 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.1■□□□□ 0.65
PMS1P54277 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.1■□□□□ 0.65
PMS1P54277 STK19B-204ENST00000512515 211 ntBASIC19.1■□□□□ 0.65
PMS1P54277 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.1■□□□□ 0.65
PMS1P54277 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.1■□□□□ 0.65
PMS1P54277 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PMS1P54277 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.1■□□□□ 0.65
PMS1P54277 AC073592.5-201ENST00000624854 528 ntBASIC19.1■□□□□ 0.65
PMS1P54277 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PMS1P54277 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.1■□□□□ 0.65
PMS1P54277 AC148477.5-201ENST00000625164 1645 ntBASIC19.1■□□□□ 0.65
PMS1P54277 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PMS1P54277 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.09■□□□□ 0.65
PMS1P54277 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PMS1P54277 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PMS1P54277 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.09■□□□□ 0.65
PMS1P54277 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.09■□□□□ 0.65
PMS1P54277 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.09■□□□□ 0.65
PMS1P54277 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 MINOS1P3-201ENST00000457048 203 ntBASIC19.09■□□□□ 0.65
PMS1P54277 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.09■□□□□ 0.65
PMS1P54277 AC074051.2-201ENST00000565115 352 ntBASIC19.09■□□□□ 0.65
PMS1P54277 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.09■□□□□ 0.65
PMS1P54277 AL445228.2-201ENST00000605589 952 ntBASIC19.09■□□□□ 0.65
PMS1P54277 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.09■□□□□ 0.65
PMS1P54277 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 EGFEM1P-202ENST00000431685 1563 ntBASIC19.09■□□□□ 0.65
PMS1P54277 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms