Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF140P52738 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF140P52738 SART3-203ENST00000546611 1184 ntBASIC17.28■□□□□ 0.36
ZNF140P52738 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF140P52738 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF140P52738 LINC01711-201ENST00000598340 967 ntBASIC17.28■□□□□ 0.36
ZNF140P52738 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF140P52738 AL022326.1-202ENST00000641533 845 ntBASIC17.28■□□□□ 0.36
ZNF140P52738 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF140P52738 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF140P52738 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF140P52738 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF140P52738 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF140P52738 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF140P52738 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 HCG11-201ENST00000411553 5696 ntBASIC17.27■□□□□ 0.36
ZNF140P52738 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ZNF140P52738 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
ZNF140P52738 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF140P52738 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ZNF140P52738 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF140P52738 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF140P52738 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF140P52738 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZNF140P52738 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ZNF140P52738 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ZNF140P52738 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF140P52738 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF140P52738 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 AC060834.1-201ENST00000443027 2032 ntBASIC17.26■□□□□ 0.35
ZNF140P52738 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZNF140P52738 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZNF140P52738 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF140P52738 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF140P52738 AC092053.1-201ENST00000605787 1936 ntBASIC17.26■□□□□ 0.35
ZNF140P52738 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.26■□□□□ 0.35
ZNF140P52738 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.26■□□□□ 0.35
ZNF140P52738 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZNF140P52738 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 LINC00982-205ENST00000420957 435 ntBASIC17.26■□□□□ 0.35
ZNF140P52738 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.26■□□□□ 0.35
ZNF140P52738 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.26■□□□□ 0.35
ZNF140P52738 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.26■□□□□ 0.35
ZNF140P52738 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF140P52738 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZNF140P52738 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ZNF140P52738 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF140P52738 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZNF140P52738 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF140P52738 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF140P52738 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF140P52738 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF140P52738 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZNF140P52738 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF140P52738 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF140P52738 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF140P52738 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms