Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.09■□□□□ 0.33
GTF2A1P52655 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.08■□□□□ 0.33
GTF2A1P52655 AC106881.1-201ENST00000605849 3329 ntBASIC17.08■□□□□ 0.33
GTF2A1P52655 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GTF2A1P52655 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
GTF2A1P52655 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.08■□□□□ 0.33
GTF2A1P52655 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.08■□□□□ 0.33
GTF2A1P52655 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GTF2A1P52655 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GTF2A1P52655 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.08■□□□□ 0.32
GTF2A1P52655 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.08■□□□□ 0.32
GTF2A1P52655 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
GTF2A1P52655 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.08■□□□□ 0.32
GTF2A1P52655 AC010980.2-201ENST00000587099 1412 ntBASIC17.08■□□□□ 0.32
GTF2A1P52655 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GTF2A1P52655 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.08■□□□□ 0.32
GTF2A1P52655 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
GTF2A1P52655 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GTF2A1P52655 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.08■□□□□ 0.32
GTF2A1P52655 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.08■□□□□ 0.32
GTF2A1P52655 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.08■□□□□ 0.32
GTF2A1P52655 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.08■□□□□ 0.32
GTF2A1P52655 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GTF2A1P52655 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.08■□□□□ 0.32
GTF2A1P52655 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GTF2A1P52655 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
GTF2A1P52655 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2A1P52655 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GTF2A1P52655 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GTF2A1P52655 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GTF2A1P52655 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 AC034268.1-201ENST00000441047 882 ntBASIC17.07■□□□□ 0.32
GTF2A1P52655 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.07■□□□□ 0.32
GTF2A1P52655 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.07■□□□□ 0.32
GTF2A1P52655 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 AC008694.1-202ENST00000636953 945 ntBASIC17.07■□□□□ 0.32
GTF2A1P52655 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.07■□□□□ 0.32
GTF2A1P52655 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.07■□□□□ 0.32
GTF2A1P52655 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 AC022532.1-201ENST00000624563 1728 ntBASIC17.07■□□□□ 0.32
GTF2A1P52655 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.07■□□□□ 0.32
GTF2A1P52655 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.07■□□□□ 0.32
GTF2A1P52655 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GTF2A1P52655 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GTF2A1P52655 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms