Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCN4P51793 PAWRP1-201ENST00000451083 565 ntBASIC18.21■□□□□ 0.51
CLCN4P51793 AL513480.1-201ENST00000451731 511 ntBASIC18.21■□□□□ 0.51
CLCN4P51793 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.21■□□□□ 0.51
CLCN4P51793 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 HLA-J-203ENST00000494367 1087 ntBASIC18.21■□□□□ 0.51
CLCN4P51793 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN4P51793 AC022145.2-201ENST00000598203 171 ntBASIC18.21■□□□□ 0.51
CLCN4P51793 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN4P51793 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN4P51793 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CLCN4P51793 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLCN4P51793 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLCN4P51793 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN4P51793 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN4P51793 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN4P51793 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN4P51793 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCN4P51793 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.2■□□□□ 0.5
CLCN4P51793 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN4P51793 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCN4P51793 SPCS2P1-201ENST00000561636 679 ntBASIC18.2■□□□□ 0.5
CLCN4P51793 AC004449.1-201ENST00000564240 433 ntBASIC18.2■□□□□ 0.5
CLCN4P51793 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 AC046185.3-201ENST00000623228 1824 ntBASIC18.2■□□□□ 0.5
CLCN4P51793 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN4P51793 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN4P51793 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN4P51793 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN4P51793 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN4P51793 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN4P51793 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN4P51793 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN4P51793 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN4P51793 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLCN4P51793 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN4P51793 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN4P51793 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN4P51793 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN4P51793 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCN4P51793 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN4P51793 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN4P51793 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCN4P51793 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLCN4P51793 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN4P51793 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN4P51793 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN4P51793 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCN4P51793 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.18■□□□□ 0.5
CLCN4P51793 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN4P51793 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLCN4P51793 SLC25A6P2-201ENST00000497974 877 ntBASIC18.18■□□□□ 0.5
CLCN4P51793 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN4P51793 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN4P51793 AC112191.1-201ENST00000523689 701 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms