Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFSF9P41273 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.78■□□□□ 0.6
TNFSF9P41273 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TNFSF9P41273 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFSF9P41273 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFSF9P41273 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFSF9P41273 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TNFSF9P41273 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFSF9P41273 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF9P41273 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF9P41273 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF9P41273 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF9P41273 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFSF9P41273 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF9P41273 PTCHD3P3-201ENST00000403073 906 ntBASIC18.77■□□□□ 0.6
TNFSF9P41273 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF9P41273 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFSF9P41273 UNC93B6-202ENST00000528242 690 ntBASIC18.77■□□□□ 0.6
TNFSF9P41273 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.77■□□□□ 0.6
TNFSF9P41273 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF9P41273 MIR1199-201ENST00000621445 119 ntBASIC18.77■□□□□ 0.6
TNFSF9P41273 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TNFSF9P41273 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF9P41273 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF9P41273 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF9P41273 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF9P41273 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TNFSF9P41273 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF9P41273 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF9P41273 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TNFSF9P41273 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF9P41273 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 AC104109.2-201ENST00000602919 1418 ntBASIC18.76■□□□□ 0.59
TNFSF9P41273 AC139713.2-201ENST00000641328 2723 ntBASIC18.76■□□□□ 0.59
TNFSF9P41273 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TNFSF9P41273 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFSF9P41273 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFSF9P41273 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TNFSF9P41273 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 GPR89P-201ENST00000407924 1495 ntBASIC18.76■□□□□ 0.59
TNFSF9P41273 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
TNFSF9P41273 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF9P41273 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TNFSF9P41273 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFSF9P41273 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFSF9P41273 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFSF9P41273 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TNFSF9P41273 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.75■□□□□ 0.59
TNFSF9P41273 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.75■□□□□ 0.59
TNFSF9P41273 RPS15P9-201ENST00000494093 319 ntBASIC18.75■□□□□ 0.59
TNFSF9P41273 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.75■□□□□ 0.59
TNFSF9P41273 AL671883.3-201ENST00000603274 991 ntBASIC18.75■□□□□ 0.59
TNFSF9P41273 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TNFSF9P41273 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.75■□□□□ 0.59
TNFSF9P41273 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF9P41273 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.74■□□□□ 0.59
TNFSF9P41273 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TNFSF9P41273 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFSF9P41273 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TNFSF9P41273 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms