Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HADHAP40939 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.62■□□□□ 0.41
HADHAP40939 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HADHAP40939 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.61■□□□□ 0.41
HADHAP40939 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.61■□□□□ 0.41
HADHAP40939 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.61■□□□□ 0.41
HADHAP40939 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HADHAP40939 PCDHA12-202ENST00000613593 2588 ntBASIC17.61■□□□□ 0.41
HADHAP40939 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.61■□□□□ 0.41
HADHAP40939 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.61■□□□□ 0.41
HADHAP40939 POM121L3P-201ENST00000419331 1163 ntBASIC17.61■□□□□ 0.41
HADHAP40939 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.61■□□□□ 0.41
HADHAP40939 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.61■□□□□ 0.41
HADHAP40939 IGHV3-52-201ENST00000519770 353 ntBASIC17.61■□□□□ 0.41
HADHAP40939 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.61■□□□□ 0.41
HADHAP40939 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.61■□□□□ 0.41
HADHAP40939 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.61■□□□□ 0.41
HADHAP40939 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HADHAP40939 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 TP73-AS1-210ENST00000637775 1455 ntBASIC17.61■□□□□ 0.41
HADHAP40939 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.61■□□□□ 0.41
HADHAP40939 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.61■□□□□ 0.41
HADHAP40939 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HADHAP40939 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.6■□□□□ 0.41
HADHAP40939 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HADHAP40939 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.6■□□□□ 0.41
HADHAP40939 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 AC111152.3-201ENST00000569699 673 ntBASIC17.6■□□□□ 0.41
HADHAP40939 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.6■□□□□ 0.41
HADHAP40939 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HADHAP40939 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.6■□□□□ 0.41
HADHAP40939 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.6■□□□□ 0.41
HADHAP40939 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.6■□□□□ 0.41
HADHAP40939 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HADHAP40939 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HADHAP40939 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HADHAP40939 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HADHAP40939 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.59■□□□□ 0.41
HADHAP40939 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HADHAP40939 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.59■□□□□ 0.41
HADHAP40939 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.59■□□□□ 0.41
HADHAP40939 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HADHAP40939 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.59■□□□□ 0.41
HADHAP40939 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.59■□□□□ 0.41
HADHAP40939 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.59■□□□□ 0.41
HADHAP40939 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.59■□□□□ 0.41
HADHAP40939 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.59■□□□□ 0.41
HADHAP40939 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.59■□□□□ 0.41
HADHAP40939 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HADHAP40939 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms