Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP8P40818 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP8P40818 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.98■□□□□ 0.63
USP8P40818 PCED1CP-201ENST00000419887 785 ntBASIC18.98■□□□□ 0.63
USP8P40818 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP8P40818 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.98■□□□□ 0.63
USP8P40818 AL121672.3-201ENST00000608644 468 ntBASIC18.98■□□□□ 0.63
USP8P40818 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP8P40818 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.98■□□□□ 0.63
USP8P40818 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.98■□□□□ 0.63
USP8P40818 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.98■□□□□ 0.63
USP8P40818 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.98■□□□□ 0.63
USP8P40818 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP8P40818 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.98■□□□□ 0.63
USP8P40818 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP8P40818 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.98■□□□□ 0.63
USP8P40818 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
USP8P40818 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
USP8P40818 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
USP8P40818 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.97■□□□□ 0.63
USP8P40818 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 AL162727.3-201ENST00000635661 2787 ntBASIC18.97■□□□□ 0.63
USP8P40818 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.97■□□□□ 0.63
USP8P40818 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
USP8P40818 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.97■□□□□ 0.63
USP8P40818 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.97■□□□□ 0.63
USP8P40818 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.97■□□□□ 0.63
USP8P40818 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.97■□□□□ 0.63
USP8P40818 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
USP8P40818 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
USP8P40818 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.97■□□□□ 0.63
USP8P40818 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 AC010460.3-201ENST00000511359 1579 ntBASIC18.97■□□□□ 0.63
USP8P40818 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP8P40818 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.97■□□□□ 0.63
USP8P40818 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP8P40818 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.97■□□□□ 0.63
USP8P40818 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.96■□□□□ 0.63
USP8P40818 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.96■□□□□ 0.63
USP8P40818 AC108860.2-201ENST00000562760 2183 ntBASIC18.96■□□□□ 0.63
USP8P40818 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.96■□□□□ 0.63
USP8P40818 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.96■□□□□ 0.63
USP8P40818 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 IER3-202ENST00000376377 1350 ntBASIC18.96■□□□□ 0.63
USP8P40818 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.96■□□□□ 0.63
USP8P40818 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.96■□□□□ 0.63
USP8P40818 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.96■□□□□ 0.63
USP8P40818 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.96■□□□□ 0.63
USP8P40818 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.96■□□□□ 0.63
USP8P40818 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.96■□□□□ 0.63
USP8P40818 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 CROCCP2-202ENST00000412962 2773 ntBASIC18.96■□□□□ 0.63
USP8P40818 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP8P40818 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP8P40818 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP8P40818 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP8P40818 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP8P40818 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms