Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
BCKDHBP21953 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BCKDHBP21953 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHBP21953 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.07■□□□□ 0.32
BCKDHBP21953 TFAMP1-201ENST00000412727 736 ntBASIC17.07■□□□□ 0.32
BCKDHBP21953 KRT18P32-201ENST00000424695 1287 ntBASIC17.07■□□□□ 0.32
BCKDHBP21953 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.07■□□□□ 0.32
BCKDHBP21953 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 INGX-202ENST00000489074 768 ntBASIC17.07■□□□□ 0.32
BCKDHBP21953 FAM86C2P-203ENST00000528684 1004 ntBASIC17.07■□□□□ 0.32
BCKDHBP21953 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHBP21953 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.07■□□□□ 0.32
BCKDHBP21953 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHBP21953 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
BCKDHBP21953 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHBP21953 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHBP21953 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.06■□□□□ 0.32
BCKDHBP21953 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
BCKDHBP21953 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 AC015922.1-201ENST00000421102 1152 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 CNN2P2-201ENST00000443536 909 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 CNN2P3-201ENST00000450201 906 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AC069335.1-201ENST00000489972 472 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AC107918.2-201ENST00000530817 355 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AC243562.1-201ENST00000560672 389 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AC051619.7-201ENST00000568314 623 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 AL136317.3-201ENST00000618497 906 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AF228730.6-201ENST00000641497 218 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AC084121.3-201ENST00000641716 218 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 AC105233.6-201ENST00000642093 218 ntBASIC17.06■□□□□ 0.32
BCKDHBP21953 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BCKDHBP21953 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
BCKDHBP21953 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHBP21953 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHBP21953 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHBP21953 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHBP21953 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHBP21953 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 AC236430.1-201ENST00000402231 743 ntBASIC17.05■□□□□ 0.32
BCKDHBP21953 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHBP21953 AC055876.3-201ENST00000431496 288 ntBASIC17.05■□□□□ 0.32
BCKDHBP21953 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BCKDHBP21953 AC190387.1-201ENST00000551683 408 ntBASIC17.05■□□□□ 0.32
BCKDHBP21953 AL135744.1-201ENST00000565098 629 ntBASIC17.05■□□□□ 0.32
BCKDHBP21953 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHBP21953 AC138649.4-201ENST00000612222 287 ntBASIC17.05■□□□□ 0.32
BCKDHBP21953 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.05■□□□□ 0.32
BCKDHBP21953 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHBP21953 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms