Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NCLP19338 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.74■□□□□ 0.91
NCLP19338 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
NCLP19338 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 RNF152P1-201ENST00000397754 604 ntBASIC20.73■□□□□ 0.91
NCLP19338 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.73■□□□□ 0.91
NCLP19338 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NCLP19338 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 YBX1P2-201ENST00000489612 999 ntBASIC20.73■□□□□ 0.91
NCLP19338 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.73■□□□□ 0.91
NCLP19338 DUTP2-201ENST00000519164 463 ntBASIC20.73■□□□□ 0.91
NCLP19338 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NCLP19338 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.73■□□□□ 0.91
NCLP19338 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NCLP19338 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.73■□□□□ 0.91
NCLP19338 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
NCLP19338 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC20.73■□□□□ 0.91
NCLP19338 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NCLP19338 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.73■□□□□ 0.91
NCLP19338 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCLP19338 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.72■□□□□ 0.91
NCLP19338 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.72■□□□□ 0.91
NCLP19338 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.72■□□□□ 0.91
NCLP19338 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NCLP19338 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NCLP19338 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NCLP19338 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 AC022898.2-201ENST00000616822 1312 ntBASIC20.72■□□□□ 0.91
NCLP19338 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NCLP19338 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NCLP19338 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.72■□□□□ 0.91
NCLP19338 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCLP19338 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.71■□□□□ 0.91
NCLP19338 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.71■□□□□ 0.91
NCLP19338 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
NCLP19338 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.71■□□□□ 0.91
NCLP19338 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.71■□□□□ 0.91
NCLP19338 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.71■□□□□ 0.91
NCLP19338 LINC01238-205ENST00000567549 1107 ntBASIC20.71■□□□□ 0.91
NCLP19338 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NCLP19338 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.71■□□□□ 0.91
NCLP19338 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NCLP19338 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NCLP19338 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NCLP19338 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NCLP19338 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLP19338 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms