Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT3P12035 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
KRT3P12035 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT3P12035 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT3P12035 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT3P12035 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT3P12035 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT3P12035 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.33■□□□□ 0.53
KRT3P12035 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT3P12035 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT3P12035 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
KRT3P12035 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT3P12035 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 NUS1P2-201ENST00000417358 873 ntBASIC18.33■□□□□ 0.52
KRT3P12035 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
KRT3P12035 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT3P12035 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT3P12035 AC073592.5-201ENST00000624854 528 ntBASIC18.33■□□□□ 0.52
KRT3P12035 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT3P12035 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 AC116353.5-201ENST00000638148 1699 ntBASIC18.33■□□□□ 0.52
KRT3P12035 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
KRT3P12035 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KRT3P12035 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT3P12035 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KRT3P12035 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT3P12035 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
KRT3P12035 AC003669.1-201ENST00000334569 611 ntBASIC18.32■□□□□ 0.52
KRT3P12035 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
KRT3P12035 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT3P12035 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT3P12035 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT3P12035 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 AC009336.1-201ENST00000608941 1553 ntBASIC18.32■□□□□ 0.52
KRT3P12035 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT3P12035 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KRT3P12035 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT3P12035 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
KRT3P12035 AC080080.1-201ENST00000625121 2420 ntBASIC18.31■□□□□ 0.52
KRT3P12035 PMPCAP1-201ENST00000508114 1576 ntBASIC18.31■□□□□ 0.52
KRT3P12035 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 HCG4P8-203ENST00000443049 980 ntBASIC18.31■□□□□ 0.52
KRT3P12035 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT3P12035 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT3P12035 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT3P12035 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT3P12035 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 AC138894.3-201ENST00000603787 634 ntBASIC18.31■□□□□ 0.52
KRT3P12035 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT3P12035 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
KRT3P12035 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms