Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 CRYGEP-201ENST00000412192 528 ntBASIC13.6□□□□□ -0.23
CD28P10747 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 DDX43P3-201ENST00000441064 443 ntBASIC13.6□□□□□ -0.23
CD28P10747 KRT18P2-201ENST00000447938 1258 ntBASIC13.6□□□□□ -0.23
CD28P10747 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.6□□□□□ -0.23
CD28P10747 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.6□□□□□ -0.23
CD28P10747 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.6□□□□□ -0.23
CD28P10747 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.6□□□□□ -0.23
CD28P10747 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.6□□□□□ -0.23
CD28P10747 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.6□□□□□ -0.23
CD28P10747 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.6□□□□□ -0.23
CD28P10747 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.6□□□□□ -0.23
CD28P10747 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 PKD1P5-201ENST00000532415 10291 ntBASIC13.59□□□□□ -0.23
CD28P10747 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.59□□□□□ -0.23
CD28P10747 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.59□□□□□ -0.23
CD28P10747 AC004832.2-201ENST00000426397 482 ntBASIC13.59□□□□□ -0.23
CD28P10747 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 AC108073.2-201ENST00000464002 357 ntBASIC13.59□□□□□ -0.23
CD28P10747 RPS15P9-201ENST00000494093 319 ntBASIC13.59□□□□□ -0.23
CD28P10747 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.59□□□□□ -0.23
CD28P10747 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 STK25P1-201ENST00000585406 838 ntBASIC13.59□□□□□ -0.23
CD28P10747 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.59□□□□□ -0.23
CD28P10747 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms