Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 SART3-203ENST00000546611 1184 ntBASIC17.62■□□□□ 0.41
HLA-DQB2P05538 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 LINC01711-201ENST00000598340 967 ntBASIC17.62■□□□□ 0.41
HLA-DQB2P05538 AL139288.1-201ENST00000623748 933 ntBASIC17.62■□□□□ 0.41
HLA-DQB2P05538 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.62■□□□□ 0.41
HLA-DQB2P05538 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.62■□□□□ 0.41
HLA-DQB2P05538 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 AL356309.3-201ENST00000624132 1934 ntBASIC17.62■□□□□ 0.41
HLA-DQB2P05538 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB2P05538 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 EMBP1-201ENST00000458200 901 ntBASIC17.6■□□□□ 0.41
HLA-DQB2P05538 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 AC097637.2-201ENST00000624096 1997 ntBASIC17.6■□□□□ 0.41
HLA-DQB2P05538 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB2P05538 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms