Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19■□□□□ 0.63
VTNP04004 AC004877.2-201ENST00000623941 599 ntBASIC19■□□□□ 0.63
VTNP04004 AC134684.3-201ENST00000641758 218 ntBASIC19■□□□□ 0.63
VTNP04004 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VTNP04004 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 HTR7P1-202ENST00000624664 4411 ntBASIC19■□□□□ 0.63
VTNP04004 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VTNP04004 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19■□□□□ 0.63
VTNP04004 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
VTNP04004 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19■□□□□ 0.63
VTNP04004 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.99■□□□□ 0.63
VTNP04004 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VTNP04004 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VTNP04004 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.99■□□□□ 0.63
VTNP04004 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.99■□□□□ 0.63
VTNP04004 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.99■□□□□ 0.63
VTNP04004 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
VTNP04004 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.99■□□□□ 0.63
VTNP04004 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.99■□□□□ 0.63
VTNP04004 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VTNP04004 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.99■□□□□ 0.63
VTNP04004 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.99■□□□□ 0.63
VTNP04004 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTNP04004 BCAR1-209ENST00000546196 1340 ntBASIC18.99■□□□□ 0.63
VTNP04004 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.98■□□□□ 0.63
VTNP04004 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VTNP04004 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VTNP04004 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.98■□□□□ 0.63
VTNP04004 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.98■□□□□ 0.63
VTNP04004 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.98■□□□□ 0.63
VTNP04004 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 AC008764.6-201ENST00000595909 2069 ntBASIC18.98■□□□□ 0.63
VTNP04004 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VTNP04004 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VTNP04004 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 AC004967.1-201ENST00000453589 447 ntBASIC18.98■□□□□ 0.63
VTNP04004 AC096734.2-201ENST00000562054 433 ntBASIC18.98■□□□□ 0.63
VTNP04004 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.98■□□□□ 0.63
VTNP04004 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.98■□□□□ 0.63
VTNP04004 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.98■□□□□ 0.63
VTNP04004 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VTNP04004 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.98■□□□□ 0.63
VTNP04004 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTNP04004 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.98■□□□□ 0.63
VTNP04004 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 AC007613.1-201ENST00000572811 2597 ntBASIC18.97■□□□□ 0.63
VTNP04004 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.97■□□□□ 0.63
VTNP04004 NOC2LP1-202ENST00000452600 2235 ntBASIC18.97■□□□□ 0.63
VTNP04004 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VTNP04004 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.97■□□□□ 0.63
VTNP04004 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VTNP04004 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VTNP04004 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.97■□□□□ 0.63
VTNP04004 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.97■□□□□ 0.63
VTNP04004 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.97■□□□□ 0.63
VTNP04004 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.97■□□□□ 0.63
VTNP04004 AL078644.1-201ENST00000609881 752 ntBASIC18.97■□□□□ 0.63
VTNP04004 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.97■□□□□ 0.63
VTNP04004 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 AC133963.1-201ENST00000504166 1679 ntBASIC18.97■□□□□ 0.63
VTNP04004 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
VTNP04004 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms