Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 AL365203.3-201ENST00000609742 2057 ntBASIC13.12□□□□□ -0.31
HLA-DQA1P01909 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DQA1P01909 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 REXO1L11P-201ENST00000620964 1927 ntBASIC13.11□□□□□ -0.31
HLA-DQA1P01909 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 AL365209.1-201ENST00000624418 6473 ntBASIC13.11□□□□□ -0.31
HLA-DQA1P01909 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 POM121L13P-201ENST00000422362 380 ntBASIC13.11□□□□□ -0.31
HLA-DQA1P01909 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 AC120498.8-201ENST00000614275 531 ntBASIC13.11□□□□□ -0.31
HLA-DQA1P01909 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DQA1P01909 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 RNF216P1-203ENST00000404404 2427 ntBASIC13.1□□□□□ -0.31
HLA-DQA1P01909 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 AL662844.4-201ENST00000606367 2838 ntBASIC13.1□□□□□ -0.31
HLA-DQA1P01909 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 AC026366.1-201ENST00000488803 879 ntBASIC13.1□□□□□ -0.31
HLA-DQA1P01909 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
HLA-DQA1P01909 LINC02012-201ENST00000608206 1725 ntBASIC13.1□□□□□ -0.31
HLA-DQA1P01909 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms