Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.48■□□□□ 0.71
GGPS1O95749 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.48■□□□□ 0.71
GGPS1O95749 AC002310.6-201ENST00000624451 1377 ntBASIC19.48■□□□□ 0.71
GGPS1O95749 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.48■□□□□ 0.71
GGPS1O95749 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
GGPS1O95749 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.48■□□□□ 0.71
GGPS1O95749 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.48■□□□□ 0.71
GGPS1O95749 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.48■□□□□ 0.71
GGPS1O95749 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.48■□□□□ 0.71
GGPS1O95749 AL139327.4-201ENST00000612362 153 ntBASIC19.48■□□□□ 0.71
GGPS1O95749 GGTLC5P-201ENST00000617623 998 ntBASIC19.48■□□□□ 0.71
GGPS1O95749 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.48■□□□□ 0.71
GGPS1O95749 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.48■□□□□ 0.71
GGPS1O95749 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.48■□□□□ 0.71
GGPS1O95749 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 AL590787.1-201ENST00000568856 1315 ntBASIC19.48■□□□□ 0.71
GGPS1O95749 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.48■□□□□ 0.71
GGPS1O95749 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GGPS1O95749 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.47■□□□□ 0.71
GGPS1O95749 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.47■□□□□ 0.71
GGPS1O95749 MCCD1P2-201ENST00000423228 335 ntBASIC19.47■□□□□ 0.71
GGPS1O95749 SLC25A6P5-201ENST00000435663 894 ntBASIC19.47■□□□□ 0.71
GGPS1O95749 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GGPS1O95749 OR7E47P-204ENST00000575924 449 ntBASIC19.47■□□□□ 0.71
GGPS1O95749 AL513190.1-201ENST00000621254 727 ntBASIC19.47■□□□□ 0.71
GGPS1O95749 LINC01451-201ENST00000623792 534 ntBASIC19.47■□□□□ 0.71
GGPS1O95749 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GGPS1O95749 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.47■□□□□ 0.71
GGPS1O95749 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.47■□□□□ 0.71
GGPS1O95749 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GGPS1O95749 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GGPS1O95749 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GGPS1O95749 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
GGPS1O95749 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.46■□□□□ 0.71
GGPS1O95749 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 PI4KAP1-204ENST00000612579 1703 ntBASIC19.46■□□□□ 0.71
GGPS1O95749 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.46■□□□□ 0.71
GGPS1O95749 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
GGPS1O95749 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.46■□□□□ 0.71
GGPS1O95749 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.46■□□□□ 0.71
GGPS1O95749 RPS8P6-201ENST00000426177 609 ntBASIC19.46■□□□□ 0.71
GGPS1O95749 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.46■□□□□ 0.71
GGPS1O95749 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.46■□□□□ 0.71
GGPS1O95749 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
GGPS1O95749 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 AC020916.1-201ENST00000587762 1774 ntBASIC19.46■□□□□ 0.71
GGPS1O95749 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.46■□□□□ 0.71
GGPS1O95749 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.46■□□□□ 0.71
GGPS1O95749 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GGPS1O95749 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.46■□□□□ 0.71
GGPS1O95749 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms