Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.21■□□□□ 0.51
BEST1O76090 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.21■□□□□ 0.51
BEST1O76090 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 AC009947.1-201ENST00000444350 727 ntBASIC18.21■□□□□ 0.51
BEST1O76090 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 RPS15P9-201ENST00000494093 319 ntBASIC18.21■□□□□ 0.51
BEST1O76090 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.21■□□□□ 0.51
BEST1O76090 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.21■□□□□ 0.51
BEST1O76090 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.21■□□□□ 0.51
BEST1O76090 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
BEST1O76090 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
BEST1O76090 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
BEST1O76090 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST1O76090 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 MIR574-201ENST00000385209 96 ntBASIC18.2■□□□□ 0.5
BEST1O76090 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST1O76090 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 Z83851.2-201ENST00000609564 659 ntBASIC18.2■□□□□ 0.5
BEST1O76090 AC005593.1-201ENST00000624894 515 ntBASIC18.2■□□□□ 0.5
BEST1O76090 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BEST1O76090 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST1O76090 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BEST1O76090 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST1O76090 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BEST1O76090 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST1O76090 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST1O76090 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST1O76090 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST1O76090 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BEST1O76090 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BEST1O76090 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST1O76090 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST1O76090 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.19■□□□□ 0.5
BEST1O76090 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.19■□□□□ 0.5
BEST1O76090 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST1O76090 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST1O76090 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BEST1O76090 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BEST1O76090 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST1O76090 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST1O76090 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST1O76090 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST1O76090 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST1O76090 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST1O76090 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 AC016396.2-201ENST00000562575 1417 ntBASIC18.18■□□□□ 0.5
BEST1O76090 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.18■□□□□ 0.5
BEST1O76090 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 AC008667.4-201ENST00000607370 168 ntBASIC18.18■□□□□ 0.5
BEST1O76090 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.18■□□□□ 0.5
BEST1O76090 PGM5P2-202ENST00000637225 1043 ntBASIC18.18■□□□□ 0.5
BEST1O76090 AL805961.1-202ENST00000641562 540 ntBASIC18.18■□□□□ 0.5
BEST1O76090 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST1O76090 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.18■□□□□ 0.5
BEST1O76090 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST1O76090 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BEST1O76090 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST1O76090 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST1O76090 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
BEST1O76090 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
BEST1O76090 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms