Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC7.66□□□□□ -1.18
USH2AO75445 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 TUBB1P2-201ENST00000422712 1306 ntBASIC7.66□□□□□ -1.18
USH2AO75445 TUBB1P1-201ENST00000503144 1300 ntBASIC7.66□□□□□ -1.18
USH2AO75445 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 EFS-203ENST00000429593 2610 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 AL080243.2-201ENST00000418783 582 ntBASIC7.65□□□□□ -1.18
USH2AO75445 AC142381.1-201ENST00000426099 345 ntBASIC7.65□□□□□ -1.18
USH2AO75445 RNA5SP412-201ENST00000516234 123 ntBASIC7.65□□□□□ -1.18
USH2AO75445 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC7.65□□□□□ -1.18
USH2AO75445 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC7.65□□□□□ -1.18
USH2AO75445 APOC4-201ENST00000591600 348 ntTSL 3 BASIC7.65□□□□□ -1.18
USH2AO75445 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
USH2AO75445 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
USH2AO75445 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
USH2AO75445 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
USH2AO75445 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC7.65□□□□□ -1.18
USH2AO75445 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 IGHJ2P-201ENST00000454480 60 ntBASIC7.65□□□□□ -1.18
USH2AO75445 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC7.65□□□□□ -1.18
USH2AO75445 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 AC007431.3-201ENST00000623221 587 ntBASIC7.65□□□□□ -1.18
USH2AO75445 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC7.65□□□□□ -1.18
USH2AO75445 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC7.65□□□□□ -1.18
USH2AO75445 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
USH2AO75445 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC7.65□□□□□ -1.18
USH2AO75445 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC7.65□□□□□ -1.18
USH2AO75445 AL391825.1-201ENST00000457671 1364 ntBASIC7.65□□□□□ -1.18
USH2AO75445 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC7.65□□□□□ -1.18
USH2AO75445 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
USH2AO75445 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC7.65□□□□□ -1.18
USH2AO75445 BTNL10-201ENST00000595971 695 ntBASIC7.65□□□□□ -1.18
USH2AO75445 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC7.65□□□□□ -1.18
USH2AO75445 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USH2AO75445 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
USH2AO75445 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
USH2AO75445 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC7.65□□□□□ -1.19
USH2AO75445 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC7.65□□□□□ -1.19
USH2AO75445 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC7.65□□□□□ -1.19
USH2AO75445 ALG1L8P-201ENST00000533887 760 ntBASIC7.65□□□□□ -1.19
USH2AO75445 AC109462.3-201ENST00000573934 613 ntBASIC7.65□□□□□ -1.19
USH2AO75445 AC091271.1-201ENST00000611877 1162 ntBASIC7.65□□□□□ -1.19
USH2AO75445 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC7.65□□□□□ -1.19
USH2AO75445 AC008267.7-201ENST00000624570 1194 ntBASIC7.65□□□□□ -1.19
USH2AO75445 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC7.65□□□□□ -1.19
USH2AO75445 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC7.65□□□□□ -1.19
USH2AO75445 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC7.65□□□□□ -1.19
USH2AO75445 BTBD6P1-201ENST00000412176 1267 ntBASIC7.65□□□□□ -1.19
USH2AO75445 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 STK19B-204ENST00000512515 211 ntBASIC7.65□□□□□ -1.19
USH2AO75445 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC7.65□□□□□ -1.19
USH2AO75445 AP001258.2-201ENST00000529891 490 ntBASIC7.65□□□□□ -1.19
USH2AO75445 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USH2AO75445 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
USH2AO75445 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
USH2AO75445 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC7.64□□□□□ -1.19
USH2AO75445 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USH2AO75445 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
USH2AO75445 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC7.64□□□□□ -1.19
USH2AO75445 CDC14C-201ENST00000428251 1719 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms