Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRCH4O75427 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.09■□□□□ 0.49
LRCH4O75427 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRCH4O75427 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRCH4O75427 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.08■□□□□ 0.49
LRCH4O75427 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.08■□□□□ 0.49
LRCH4O75427 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.08■□□□□ 0.49
LRCH4O75427 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRCH4O75427 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRCH4O75427 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.08■□□□□ 0.48
LRCH4O75427 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.08■□□□□ 0.48
LRCH4O75427 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.08■□□□□ 0.48
LRCH4O75427 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.08■□□□□ 0.48
LRCH4O75427 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.08■□□□□ 0.48
LRCH4O75427 HCG4P8-203ENST00000443049 980 ntBASIC18.08■□□□□ 0.48
LRCH4O75427 KRT16P4-201ENST00000453883 522 ntBASIC18.08■□□□□ 0.48
LRCH4O75427 FOSL1P1-201ENST00000511041 816 ntBASIC18.08■□□□□ 0.48
LRCH4O75427 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 AL591684.3-201ENST00000605187 298 ntBASIC18.08■□□□□ 0.48
LRCH4O75427 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.08■□□□□ 0.48
LRCH4O75427 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRCH4O75427 EGFEM1P-202ENST00000431685 1563 ntBASIC18.08■□□□□ 0.48
LRCH4O75427 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH4O75427 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 SIGLEC16-201ENST00000599858 1437 ntBASIC18.07■□□□□ 0.48
LRCH4O75427 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
LRCH4O75427 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRCH4O75427 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.07■□□□□ 0.48
LRCH4O75427 AL020989.1-201ENST00000422979 469 ntBASIC18.07■□□□□ 0.48
LRCH4O75427 NUS1P1-201ENST00000446295 882 ntBASIC18.07■□□□□ 0.48
LRCH4O75427 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.07■□□□□ 0.48
LRCH4O75427 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.07■□□□□ 0.48
LRCH4O75427 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.07■□□□□ 0.48
LRCH4O75427 AP001269.4-201ENST00000609611 512 ntBASIC18.07■□□□□ 0.48
LRCH4O75427 AC073592.4-201ENST00000623827 446 ntBASIC18.07■□□□□ 0.48
LRCH4O75427 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
LRCH4O75427 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRCH4O75427 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.07■□□□□ 0.48
LRCH4O75427 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.07■□□□□ 0.48
LRCH4O75427 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.07■□□□□ 0.48
LRCH4O75427 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH4O75427 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRCH4O75427 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.06■□□□□ 0.48
LRCH4O75427 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 AC138932.1-201ENST00000534164 6830 ntBASIC18.06■□□□□ 0.48
LRCH4O75427 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRCH4O75427 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.06■□□□□ 0.48
LRCH4O75427 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH4O75427 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.06■□□□□ 0.48
LRCH4O75427 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH4O75427 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRCH4O75427 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRCH4O75427 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH4O75427 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRCH4O75427 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH4O75427 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.06■□□□□ 0.48
LRCH4O75427 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH4O75427 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH4O75427 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRCH4O75427 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH4O75427 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms