Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 RPS2P28-201ENST00000314255 741 ntBASIC17.6■□□□□ 0.41
PRAMEF11O60813 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 KRT18P27-201ENST00000427733 1299 ntBASIC17.6■□□□□ 0.41
PRAMEF11O60813 FDX1P1-201ENST00000449115 551 ntBASIC17.6■□□□□ 0.41
PRAMEF11O60813 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 AC138932.1-201ENST00000534164 6830 ntBASIC17.6■□□□□ 0.41
PRAMEF11O60813 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PRAMEF11O60813 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF11O60813 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.59■□□□□ 0.41
PRAMEF11O60813 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 AC026396.1-201ENST00000419388 421 ntBASIC17.59■□□□□ 0.41
PRAMEF11O60813 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 AC012640.2-201ENST00000561606 901 ntBASIC17.59■□□□□ 0.41
PRAMEF11O60813 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF11O60813 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF11O60813 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PRAMEF11O60813 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF11O60813 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PRAMEF11O60813 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF11O60813 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PRAMEF11O60813 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF11O60813 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.58■□□□□ 0.41
PRAMEF11O60813 EGFEM1P-202ENST00000431685 1563 ntBASIC17.58■□□□□ 0.41
PRAMEF11O60813 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF11O60813 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
PRAMEF11O60813 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF11O60813 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF11O60813 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF11O60813 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF11O60813 HLA-A-201ENST00000376802 1334 ntBASIC17.58■□□□□ 0.4
PRAMEF11O60813 AL590787.1-201ENST00000568856 1315 ntBASIC17.58■□□□□ 0.4
PRAMEF11O60813 AC108860.2-201ENST00000562760 2183 ntBASIC17.58■□□□□ 0.4
PRAMEF11O60813 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF11O60813 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF11O60813 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF11O60813 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.58■□□□□ 0.4
PRAMEF11O60813 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEF11O60813 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.58■□□□□ 0.4
PRAMEF11O60813 ELK2BP-201ENST00000415014 1224 ntBASIC17.58■□□□□ 0.4
PRAMEF11O60813 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF11O60813 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms