Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 AC138028.4-201ENST00000564984 1845 ntBASIC20.22■□□□□ 0.83
CTNND1O60716 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CTNND1O60716 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.22■□□□□ 0.83
CTNND1O60716 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
CTNND1O60716 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.21■□□□□ 0.83
CTNND1O60716 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.21■□□□□ 0.83
CTNND1O60716 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTNND1O60716 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNND1O60716 AC087163.2-201ENST00000457299 853 ntBASIC20.21■□□□□ 0.83
CTNND1O60716 HLA-J-203ENST00000494367 1087 ntBASIC20.21■□□□□ 0.83
CTNND1O60716 AC022145.2-201ENST00000598203 171 ntBASIC20.21■□□□□ 0.83
CTNND1O60716 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.21■□□□□ 0.83
CTNND1O60716 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNND1O60716 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.21■□□□□ 0.83
CTNND1O60716 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CTNND1O60716 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNND1O60716 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 AC007613.1-201ENST00000572811 2597 ntBASIC20.21■□□□□ 0.83
CTNND1O60716 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND1O60716 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.83
CTNND1O60716 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.2■□□□□ 0.82
CTNND1O60716 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND1O60716 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND1O60716 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTNND1O60716 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND1O60716 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.2■□□□□ 0.82
CTNND1O60716 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTNND1O60716 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.2■□□□□ 0.82
CTNND1O60716 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.2■□□□□ 0.82
CTNND1O60716 LINC01451-201ENST00000623792 534 ntBASIC20.2■□□□□ 0.82
CTNND1O60716 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND1O60716 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTNND1O60716 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTNND1O60716 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND1O60716 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTNND1O60716 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTNND1O60716 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.19■□□□□ 0.82
CTNND1O60716 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CTNND1O60716 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.19■□□□□ 0.82
CTNND1O60716 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.19■□□□□ 0.82
CTNND1O60716 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.19■□□□□ 0.82
CTNND1O60716 AC004449.1-201ENST00000564240 433 ntBASIC20.19■□□□□ 0.82
CTNND1O60716 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.19■□□□□ 0.82
CTNND1O60716 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTNND1O60716 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.19■□□□□ 0.82
CTNND1O60716 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTNND1O60716 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNND1O60716 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNND1O60716 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTNND1O60716 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND1O60716 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.18■□□□□ 0.82
CTNND1O60716 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
CTNND1O60716 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 AC002056.1-201ENST00000395613 760 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms