Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC064862.7-201ENST00000604520 867 ntBASIC16.19■□□□□ 0.18
PRKNO60260 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.19■□□□□ 0.18
PRKNO60260 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.19■□□□□ 0.18
PRKNO60260 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 AL022326.1-202ENST00000641533 845 ntBASIC16.19■□□□□ 0.18
PRKNO60260 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PRKNO60260 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PRKNO60260 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PRKNO60260 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.19■□□□□ 0.18
PRKNO60260 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.19■□□□□ 0.18
PRKNO60260 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PRKNO60260 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKNO60260 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PRKNO60260 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRKNO60260 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 AC009336.1-201ENST00000608941 1553 ntBASIC16.18■□□□□ 0.18
PRKNO60260 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.18■□□□□ 0.18
PRKNO60260 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 AC243591.1-201ENST00000452967 1364 ntBASIC16.18■□□□□ 0.18
PRKNO60260 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRKNO60260 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.18■□□□□ 0.18
PRKNO60260 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.18■□□□□ 0.18
PRKNO60260 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRKNO60260 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.18■□□□□ 0.18
PRKNO60260 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKNO60260 LINC01451-201ENST00000623792 534 ntBASIC16.18■□□□□ 0.18
PRKNO60260 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKNO60260 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PRKNO60260 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKNO60260 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKNO60260 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKNO60260 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKNO60260 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRKNO60260 AP000347.1-202ENST00000435868 847 ntBASIC16.17■□□□□ 0.18
PRKNO60260 PRYP5-201ENST00000451909 266 ntBASIC16.17■□□□□ 0.18
PRKNO60260 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.17■□□□□ 0.18
PRKNO60260 OR7E14P-202ENST00000530490 1290 ntBASIC16.17■□□□□ 0.18
PRKNO60260 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.17■□□□□ 0.18
PRKNO60260 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.17■□□□□ 0.18
PRKNO60260 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.17■□□□□ 0.18
PRKNO60260 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.17■□□□□ 0.18
PRKNO60260 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.17■□□□□ 0.18
PRKNO60260 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.17■□□□□ 0.18
PRKNO60260 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRKNO60260 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.17■□□□□ 0.18
PRKNO60260 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRKNO60260 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PRKNO60260 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 CROCCP2-202ENST00000412962 2773 ntBASIC16.17■□□□□ 0.18
PRKNO60260 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRKNO60260 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.17■□□□□ 0.18
PRKNO60260 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKNO60260 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.16■□□□□ 0.18
PRKNO60260 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRKNO60260 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.16■□□□□ 0.18
PRKNO60260 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKNO60260 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKNO60260 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRKNO60260 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKNO60260 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKNO60260 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms