Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.5■□□□□ 0.71
ACTN4O43707 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.5■□□□□ 0.71
ACTN4O43707 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.5■□□□□ 0.71
ACTN4O43707 VENTXP7-201ENST00000475503 772 ntBASIC19.5■□□□□ 0.71
ACTN4O43707 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.5■□□□□ 0.71
ACTN4O43707 BNIP3P18-201ENST00000593976 575 ntBASIC19.5■□□□□ 0.71
ACTN4O43707 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ACTN4O43707 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.5■□□□□ 0.71
ACTN4O43707 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
ACTN4O43707 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ACTN4O43707 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.49■□□□□ 0.71
ACTN4O43707 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ACTN4O43707 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.49■□□□□ 0.71
ACTN4O43707 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.49■□□□□ 0.71
ACTN4O43707 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.49■□□□□ 0.71
ACTN4O43707 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.49■□□□□ 0.71
ACTN4O43707 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
ACTN4O43707 AP002414.4-201ENST00000589764 1148 ntBASIC19.49■□□□□ 0.71
ACTN4O43707 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.49■□□□□ 0.71
ACTN4O43707 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
ACTN4O43707 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
ACTN4O43707 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.49■□□□□ 0.71
ACTN4O43707 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ACTN4O43707 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ACTN4O43707 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACTN4O43707 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 IER3-202ENST00000376377 1350 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
ACTN4O43707 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.48■□□□□ 0.71
ACTN4O43707 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.48■□□□□ 0.71
ACTN4O43707 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 IGHV3-47-201ENST00000425060 335 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 TOB2P1-201ENST00000469761 992 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.48■□□□□ 0.71
ACTN4O43707 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 MIR3180-1-201ENST00000580374 94 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 MIR3180-3-201ENST00000584616 94 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.48■□□□□ 0.71
ACTN4O43707 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 INTS4P1-201ENST00000438455 1935 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ACTN4O43707 EGFEM1P-202ENST00000431685 1563 ntBASIC19.48■□□□□ 0.71
ACTN4O43707 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.48■□□□□ 0.71
ACTN4O43707 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
ACTN4O43707 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ACTN4O43707 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.47■□□□□ 0.71
ACTN4O43707 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.47■□□□□ 0.71
ACTN4O43707 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ACTN4O43707 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 KRT17P6-201ENST00000453795 1220 ntBASIC19.47■□□□□ 0.71
ACTN4O43707 STK19B-204ENST00000512515 211 ntBASIC19.47■□□□□ 0.71
ACTN4O43707 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms