Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
ABCC4O15439 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC22.03■■□□□ 1.12
ABCC4O15439 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
ABCC4O15439 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC22.03■■□□□ 1.12
ABCC4O15439 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.03■■□□□ 1.12
ABCC4O15439 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
ABCC4O15439 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.03■■□□□ 1.12
ABCC4O15439 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
ABCC4O15439 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
ABCC4O15439 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCC4O15439 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.03■■□□□ 1.12
ABCC4O15439 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
ABCC4O15439 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
ABCC4O15439 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ABCC4O15439 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ABCC4O15439 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
ABCC4O15439 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22.02■■□□□ 1.12
ABCC4O15439 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC22.02■■□□□ 1.12
ABCC4O15439 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCC4O15439 AC004832.2-201ENST00000426397 482 ntBASIC22.02■■□□□ 1.12
ABCC4O15439 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
ABCC4O15439 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.02■■□□□ 1.12
ABCC4O15439 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.02■■□□□ 1.12
ABCC4O15439 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.02■■□□□ 1.11
ABCC4O15439 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
ABCC4O15439 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.02■■□□□ 1.11
ABCC4O15439 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ABCC4O15439 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.01■■□□□ 1.11
ABCC4O15439 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ABCC4O15439 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.01■■□□□ 1.11
ABCC4O15439 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.01■■□□□ 1.11
ABCC4O15439 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.01■■□□□ 1.11
ABCC4O15439 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.01■■□□□ 1.11
ABCC4O15439 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.01■■□□□ 1.11
ABCC4O15439 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.01■■□□□ 1.11
ABCC4O15439 DNAJB3-201ENST00000446806 729 ntBASIC22.01■■□□□ 1.11
ABCC4O15439 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.01■■□□□ 1.11
ABCC4O15439 SIGLEC30P-201ENST00000455569 941 ntBASIC22.01■■□□□ 1.11
ABCC4O15439 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.01■■□□□ 1.11
ABCC4O15439 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.01■■□□□ 1.11
ABCC4O15439 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.01■■□□□ 1.11
ABCC4O15439 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.01■■□□□ 1.11
ABCC4O15439 AC006557.2-201ENST00000592985 1240 ntBASIC22.01■■□□□ 1.11
ABCC4O15439 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ABCC4O15439 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.01■■□□□ 1.11
ABCC4O15439 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCC4O15439 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 RHBDF1P1-201ENST00000427504 1941 ntBASIC22■■□□□ 1.11
ABCC4O15439 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms