Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
O00370 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.55■□□□□ 0.56
O00370 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.55■□□□□ 0.56
O00370 KLF4P1-201ENST00000412782 1185 ntBASIC18.55■□□□□ 0.56
O00370 RBM17P3-201ENST00000417687 1192 ntBASIC18.55■□□□□ 0.56
O00370 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.55■□□□□ 0.56
O00370 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.55■□□□□ 0.56
O00370 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.55■□□□□ 0.56
O00370 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.55■□□□□ 0.56
O00370 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
O00370 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.55■□□□□ 0.56
O00370 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.55■□□□□ 0.56
O00370 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
O00370 AP001094.4-201ENST00000579008 2176 ntBASIC18.55■□□□□ 0.56
O00370 AC009336.1-201ENST00000608941 1553 ntBASIC18.55■□□□□ 0.56
O00370 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
O00370 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
O00370 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.54■□□□□ 0.56
O00370 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
O00370 SPDYE21P-201ENST00000413323 827 ntBASIC18.54■□□□□ 0.56
O00370 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.54■□□□□ 0.56
O00370 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.54■□□□□ 0.56
O00370 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
O00370 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 LINC01711-201ENST00000598340 967 ntBASIC18.54■□□□□ 0.56
O00370 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 AC073592.4-201ENST00000623827 446 ntBASIC18.54■□□□□ 0.56
O00370 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
O00370 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
O00370 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.54■□□□□ 0.56
O00370 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.54■□□□□ 0.56
O00370 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
O00370 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 AL450487.1-201ENST00000426799 995 ntBASIC18.53■□□□□ 0.56
O00370 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.53■□□□□ 0.56
O00370 SAPCD2P3-201ENST00000455031 850 ntBASIC18.53■□□□□ 0.56
O00370 STK19B-204ENST00000512515 211 ntBASIC18.53■□□□□ 0.56
O00370 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.53■□□□□ 0.56
O00370 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 KRT126P-201ENST00000549467 1181 ntBASIC18.53■□□□□ 0.56
O00370 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.53■□□□□ 0.56
O00370 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
O00370 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.53■□□□□ 0.56
O00370 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
O00370 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
O00370 AC046185.3-201ENST00000623228 1824 ntBASIC18.53■□□□□ 0.56
O00370 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
O00370 AC079776.2-201ENST00000641154 1609 ntBASIC18.52■□□□□ 0.56
O00370 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.52■□□□□ 0.56
O00370 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.52■□□□□ 0.56
O00370 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.52■□□□□ 0.56
O00370 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
O00370 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 SIGLEC16-201ENST00000599858 1437 ntBASIC18.52■□□□□ 0.56
O00370 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
O00370 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms