Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.5■□□□□ 0.23
UPK1AO00322 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.5■□□□□ 0.23
UPK1AO00322 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.5■□□□□ 0.23
UPK1AO00322 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.5■□□□□ 0.23
UPK1AO00322 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 AC008894.3-201ENST00000624324 3103 ntBASIC16.5■□□□□ 0.23
UPK1AO00322 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
UPK1AO00322 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1AO00322 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
UPK1AO00322 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1AO00322 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK1AO00322 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
UPK1AO00322 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
UPK1AO00322 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1AO00322 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
UPK1AO00322 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.49■□□□□ 0.23
UPK1AO00322 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1AO00322 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1AO00322 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK1AO00322 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK1AO00322 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1AO00322 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1AO00322 AP005901.3-202ENST00000581653 237 ntBASIC16.49■□□□□ 0.23
UPK1AO00322 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.49■□□□□ 0.23
UPK1AO00322 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UPK1AO00322 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UPK1AO00322 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UPK1AO00322 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1AO00322 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UPK1AO00322 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UPK1AO00322 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.48■□□□□ 0.23
UPK1AO00322 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 DRAXINP1-201ENST00000437611 948 ntBASIC16.48■□□□□ 0.23
UPK1AO00322 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.48■□□□□ 0.23
UPK1AO00322 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 TPSP2-201ENST00000561760 610 ntBASIC16.48■□□□□ 0.23
UPK1AO00322 AP002414.4-201ENST00000589764 1148 ntBASIC16.48■□□□□ 0.23
UPK1AO00322 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 AC091076.1-201ENST00000610741 619 ntBASIC16.48■□□□□ 0.23
UPK1AO00322 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.48■□□□□ 0.23
UPK1AO00322 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.48■□□□□ 0.23
UPK1AO00322 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UPK1AO00322 AC005915.1-201ENST00000624912 2018 ntBASIC16.48■□□□□ 0.23
UPK1AO00322 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1AO00322 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UPK1AO00322 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 AC016396.2-201ENST00000562575 1417 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms