Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.6■□□□□ 0.25
PDLIM1O00151 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 HYMAI-201ENST00000635591 3347 ntBASIC16.6■□□□□ 0.25
PDLIM1O00151 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 AC005915.1-201ENST00000624912 2018 ntBASIC16.6■□□□□ 0.25
PDLIM1O00151 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 AL603756.1-201ENST00000606511 2163 ntBASIC16.6■□□□□ 0.25
PDLIM1O00151 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDLIM1O00151 AC005521.1-201ENST00000393351 872 ntBASIC16.6■□□□□ 0.25
PDLIM1O00151 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.6■□□□□ 0.25
PDLIM1O00151 AC010203.1-204ENST00000548782 407 ntBASIC16.6■□□□□ 0.25
PDLIM1O00151 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
PDLIM1O00151 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.6■□□□□ 0.25
PDLIM1O00151 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.6■□□□□ 0.25
PDLIM1O00151 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.6■□□□□ 0.25
PDLIM1O00151 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PDLIM1O00151 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.6■□□□□ 0.25
PDLIM1O00151 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDLIM1O00151 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM1O00151 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM1O00151 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM1O00151 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM1O00151 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDLIM1O00151 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 FAM210CP-201ENST00000445714 574 ntBASIC16.59■□□□□ 0.25
PDLIM1O00151 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 MIR3180-5-201ENST00000583743 153 ntBASIC16.59■□□□□ 0.25
PDLIM1O00151 AL138966.2-201ENST00000621997 464 ntBASIC16.59■□□□□ 0.25
PDLIM1O00151 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.59■□□□□ 0.25
PDLIM1O00151 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.59■□□□□ 0.25
PDLIM1O00151 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.59■□□□□ 0.25
PDLIM1O00151 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDLIM1O00151 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM1O00151 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
PDLIM1O00151 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM1O00151 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM1O00151 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM1O00151 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDLIM1O00151 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.58■□□□□ 0.25
PDLIM1O00151 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 AL137013.1-201ENST00000432946 1228 ntBASIC16.58■□□□□ 0.24
PDLIM1O00151 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.58■□□□□ 0.24
PDLIM1O00151 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.58■□□□□ 0.24
PDLIM1O00151 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PDLIM1O00151 AC092865.7-201ENST00000641832 219 ntBASIC16.58■□□□□ 0.24
PDLIM1O00151 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.58■□□□□ 0.24
PDLIM1O00151 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms