Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 POM121L3P-201ENST00000419331 1163 ntBASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 STK25P1-201ENST00000585406 838 ntBASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM6-TRIM34B2RNG4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 AD001527.2-201ENST00000622994 785 ntBASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.28■■□□□ 1
TRIM6-TRIM34B2RNG4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 AC132938.5-201ENST00000624980 1813 ntBASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 FOSL1P1-201ENST00000511041 816 ntBASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 STK19B-204ENST00000512515 211 ntBASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM6-TRIM34B2RNG4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.27■□□□□ 0.99
TRIM6-TRIM34B2RNG4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM6-TRIM34B2RNG4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM6-TRIM34B2RNG4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM6-TRIM34B2RNG4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM6-TRIM34B2RNG4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM6-TRIM34B2RNG4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRIM6-TRIM34B2RNG4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM6-TRIM34B2RNG4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM6-TRIM34B2RNG4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms