Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 AC004840.1-201ENST00000636359 365 ntBASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 AL135999.2-201ENST00000622438 1686 ntBASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 KRT223P-202ENST00000449164 1292 ntBASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 AC119751.2-201ENST00000504529 210 ntBASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 AC008494.3-201ENST00000606615 944 ntBASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM88BA6NKF7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 ANO7L1-203ENST00000602586 1720 ntBASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 AL844908.2-201ENST00000609461 460 ntBASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 AC133552.6-201ENST00000613406 534 ntBASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 GPR182-203ENST00000622922 591 ntBASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM88BA6NKF7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 KRT8P44-201ENST00000441609 1350 ntBASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 TTTY23B-201ENST00000442790 549 ntBASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 WASH4P-201ENST00000564273 1246 ntBASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 TEX28P1-201ENST00000613479 1221 ntBASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 TEX28P2-201ENST00000617764 1221 ntBASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM88BA6NKF7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
TMEM88BA6NKF7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 AC234783.1-201ENST00000441761 496 ntBASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms