Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 AC116353.5-201ENST00000638148 1699 ntBASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 AC009533.2-201ENST00000543664 586 ntBASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 BNIP3P18-201ENST00000593976 575 ntBASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 NUS1P2-201ENST00000417358 873 ntBASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 AC096633.1-201ENST00000422446 749 ntBASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 FOSL1P1-201ENST00000511041 816 ntBASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF25A6NGN4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 AC016396.2-201ENST00000562575 1417 ntBASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 AC046185.3-201ENST00000623228 1824 ntBASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 AC097374.2-201ENST00000618617 1306 ntBASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 POM121L3P-201ENST00000419331 1163 ntBASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 AC114341.1-201ENST00000618070 349 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms