Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDHR4A6H8M9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDHR4A6H8M9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDHR4A6H8M9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16■□□□□ 0.15
CDHR4A6H8M9 KRT17P6-201ENST00000453795 1220 ntBASIC16■□□□□ 0.15
CDHR4A6H8M9 MINOS1P3-201ENST00000457048 203 ntBASIC16■□□□□ 0.15
CDHR4A6H8M9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16■□□□□ 0.15
CDHR4A6H8M9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16■□□□□ 0.15
CDHR4A6H8M9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16■□□□□ 0.15
CDHR4A6H8M9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16■□□□□ 0.15
CDHR4A6H8M9 AD001527.2-201ENST00000622994 785 ntBASIC16■□□□□ 0.15
CDHR4A6H8M9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16■□□□□ 0.15
CDHR4A6H8M9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CDHR4A6H8M9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CDHR4A6H8M9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 AC124067.4-201ENST00000519691 2379 ntBASIC16■□□□□ 0.15
CDHR4A6H8M9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16■□□□□ 0.15
CDHR4A6H8M9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16■□□□□ 0.15
CDHR4A6H8M9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDHR4A6H8M9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDHR4A6H8M9 LINC02012-201ENST00000608206 1725 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 NSUN5P1-202ENST00000421140 1535 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 NSUN5P2-203ENST00000457352 1529 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 LINC00265-3P-201ENST00000447588 903 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MIR3180-1-201ENST00000580374 94 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MIR3180-3-201ENST00000584616 94 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 BNIP3P18-201ENST00000593976 575 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 AL358472.4-201ENST00000633140 710 ntBASIC15.99■□□□□ 0.15
CDHR4A6H8M9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDHR4A6H8M9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 AC132938.5-201ENST00000624980 1813 ntBASIC15.98■□□□□ 0.15
CDHR4A6H8M9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 INTS4P1-201ENST00000438455 1935 ntBASIC15.98■□□□□ 0.15
CDHR4A6H8M9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CDHR4A6H8M9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms