Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 AC116353.5-201ENST00000638148 1699 ntBASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CCDC162PA2VCL2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 HCG4P8-203ENST00000443049 980 ntBASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 AC073592.5-201ENST00000624854 528 ntBASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC162PA2VCL2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 SLC25A1P3-201ENST00000395415 828 ntBASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 STK19B-204ENST00000512515 211 ntBASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 AC009336.1-201ENST00000608941 1553 ntBASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC162PA2VCL2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC162PA2VCL2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
CCDC162PA2VCL2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC162PA2VCL2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCDC162PA2VCL2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CCDC162PA2VCL2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC162PA2VCL2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCDC162PA2VCL2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 AC003669.1-201ENST00000334569 611 ntBASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 KLF4P1-201ENST00000412782 1185 ntBASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 FOSL1P1-201ENST00000511041 816 ntBASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 AC046158.3-201ENST00000624947 2558 ntBASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 PMPCAP1-201ENST00000508114 1576 ntBASIC17.39■□□□□ 0.37
CCDC162PA2VCL2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms