Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AC024563.2-201ENST00000603282 481 ntBASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AC010653.2-201ENST00000623505 997 ntBASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 PAUPAR-201ENST00000630360 2965 ntBASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 AC096633.1-201ENST00000422446 749 ntBASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 AC009947.2-201ENST00000444014 672 ntBASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 AL359736.2-201ENST00000621992 437 ntBASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 EGFEM1P-202ENST00000431685 1563 ntBASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV3S1A0A5B6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 ABHD17AP1-201ENST00000358206 933 ntBASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 AC113410.3-201ENST00000623366 203 ntBASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV3S1A0A5B6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TCRBV3S1A0A5B6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms