Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-4A0A0C4DH59 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 AP002469.2-201ENST00000531724 424 ntBASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 FRMD8P1-201ENST00000440433 1524 ntBASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC092053.1-201ENST00000605787 1936 ntBASIC17.06■□□□□ 0.32
TRBV5-4A0A0C4DH59 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 KRT18P27-201ENST00000427733 1299 ntBASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 HNRNPDP1-201ENST00000439535 754 ntBASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL160237.2-201ENST00000556165 472 ntBASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-4A0A0C4DH59 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms