Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 AC097637.2-201ENST00000624096 1997 ntBASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 AC068880.1-201ENST00000507289 2297 ntBASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 MRPL20P1-201ENST00000400819 433 ntBASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1G3Q9Y6M4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1G3Q9Y6M4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 KRT18P55-202ENST00000578578 1546 ntBASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 AC211486.1-202ENST00000416371 468 ntBASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 AP006288.1-201ENST00000446065 395 ntBASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 AC211476.1-201ENST00000503899 468 ntBASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 ABALON-201ENST00000629058 1903 ntBASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1G3Q9Y6M4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 LINC00982-205ENST00000420957 435 ntBASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 RPS8P6-201ENST00000426177 609 ntBASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 YBX1P5-201ENST00000509441 847 ntBASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 FLJ13224-201ENST00000313737 1514 ntBASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms