Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 UXT-AS1-201ENST00000590504 1525 ntBASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 BASP1P1-201ENST00000430708 665 ntBASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 KRT8P23-201ENST00000560090 1207 ntBASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 SPDYE7P-202ENST00000420373 878 ntBASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 TSSK5P-201ENST00000423978 907 ntBASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 AC097493.3-201ENST00000509725 367 ntBASIC25.97■■□□□ 1.75
CDC42BPBQ9Y5S2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 AC090164.3-201ENST00000610780 2143 ntBASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 AC007274.1-201ENST00000439805 662 ntBASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC25.96■■□□□ 1.75
CDC42BPBQ9Y5S2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPBQ9Y5S2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPBQ9Y5S2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPBQ9Y5S2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPBQ9Y5S2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPBQ9Y5S2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC25.95■■□□□ 1.75
CDC42BPBQ9Y5S2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
CDC42BPBQ9Y5S2 BX323043.1-201ENST00000641006 1765 ntBASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 MTRF1LP2-201ENST00000506027 1122 ntBASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 AP005018.1-201ENST00000525475 301 ntBASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 AC012569.1-201ENST00000591191 1524 ntBASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC25.95■■□□□ 1.74
CDC42BPBQ9Y5S2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 AL353732.1-201ENST00000569618 1459 ntBASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms